geneGATer.pl.roc_auc_classification#
- geneGATer.pl.roc_auc_classification(adata, all_metas, raw_cluster, seed=1337)#
Calculate and plot the ROC-AUC of spot clustering using metagenes.
- Parameters
adata (
AnnData) – The AnnData object to preprocess.
- all_metas
Result of getComGenes function output out[2].
- raw_cluster
Result of pre_clustering function output.
- seed
Set seed for reproducibility.
- Returns
Heatmap of ROC-AUC of spot clustering using metagenes.